STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10743280UPF0176 protein CE2830; Belongs to the UPF0176 family. (312 aa)    
Predicted Functional Partners:
BAC19639.1
Conserved hypothetical protein; CE2829, similar to AL583923-158|CAC30877.1| percent identity: 51 in 108 aa.
       0.683
BAC19641.1
Conserved hypothetical protein; CE2831, similar to AL603642-239|CAC48639.1| percent identity: 63 in 362 aa.
       0.537
BAC19603.1
Conserved hypothetical protein; CE2793, similar to AX064301-1|CAC25391.1| percent identity: 75 in 339 aa.
 
     0.404
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.