STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10743340Uncharacterized protein. (202 aa)    
Predicted Functional Partners:
gene:10743338
Uncharacterized protein.
 
     0.962
BAC19699.1
Hypothetical protein; CE2889.
 
     0.962
BAC17833.1
Conserved hypothetical protein; CE1023, similar to AL132856-7|CAB60467.1| percent identity: 33 in 325 aa.
 
     0.519
BAC19697.1
Conserved hypothetical protein; CE2887, similar to Z99109-115|CAB12879.1| percent identity: 34 in 499 aa.
       0.502
gene:10741509
Putative ABC transporter ATP-binding protein.
  
     0.467
BAC19701.1
Conserved hypothetical protein; CE2891, similar to AL646080-25|CAD17818.1| percent identity: 22 in 396 aa.
       0.444
gene:10743138
Uncharacterized protein.
 
     0.440
gene:10742647
Uncharacterized protein.
 
     0.417
BAC17104.1
Conserved hypothetical protein; CE0294, similar to AE001940-6|AAF10446.1| percent identity: 23 in 150 aa.
 
     0.414
BAC18918.1
Conserved hypothetical protein; CE2108, similar to AJ276511-1|CAC06383.1| percent identity: 22 in 148 aa.
 
     0.406
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.