STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002050365_02367Unannotated protein. (504 aa)    
Predicted Functional Partners:
GCA_002050365_02368
Unannotated protein.
 
 
  0.892
GCA_002050365_01964
Unannotated protein.
 
   
  0.859
GCA_002050365_02841
Unannotated protein.
  
 0.769
GCA_002050365_01867
Unannotated protein.
   
 0.758
GCA_002050365_00852
Unannotated protein.
   
 0.718
GCA_002050365_02962
Unannotated protein.
    
 0.712
GCA_002050365_03333
Unannotated protein.
   
 
 0.699
GCA_002050365_03601
Unannotated protein.
   
 
 0.699
GCA_002050365_01538
Unannotated protein.
  
 
 0.689
GCA_002050365_00393
Unannotated protein.
  
 0.686
Your Current Organism:
Acidobacteria bacterium 281
NCBI taxonomy Id: 1962177
Other names: A. bacterium 28-1, Acidobacteria bacterium 28-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.