STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQU81501.1CsbD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. (59 aa)    
Predicted Functional Partners:
AQU83049.1
DUF1328 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.846
AQU81580.1
DUF3008 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.724
AQU81330.1
GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.582
AQU81499.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.579
AQU81500.1
1,4-alpha-glucan branching protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.578
AQU81470.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.571
AQU82048.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.571
AQU83674.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.571
AQU83484.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.569
AQU85080.1
Capsid assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.544
Your Current Organism:
Halomonas sp. Soap
NCBI taxonomy Id: 1962264
Other names: H. sp. 'Soap Lake #7', Halomonas sp. 'Soap Lake #7'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.