STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQU83549.1C-type lysozyme, inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)    
Predicted Functional Partners:
AQU83550.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.825
AQU82564.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.748
AQU81468.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.734
AQU84542.1
NERD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.721
AQU82903.1
Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.696
AQU83551.1
3-deoxy-7-phosphoheptulonate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).
  
    0.665
AQU83187.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.617
AQU82360.1
DUF1338 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.606
AQU82567.1
Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.590
AQU83627.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.578
Your Current Organism:
Halomonas sp. Soap
NCBI taxonomy Id: 1962264
Other names: H. sp. 'Soap Lake #7', Halomonas sp. 'Soap Lake #7'
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