STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQJ27_00780Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)    
Predicted Functional Partners:
ectC
L-ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant.
    
 0.761
KUN48285.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.574
KUN47590.1
X-Pro dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.525
KUN43546.1
Peptidase M24; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.525
pepPI_1
Xaa-Pro aminopeptidase 1; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M24B family.
    
 0.525
pepPI_2
Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.525
KUN40627.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.524
aspC
Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.472
KUN43868.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.433
KUN47091.1
decaprenylphosphoryl-beta-D-ribose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.432
Your Current Organism:
Streptomyces olivochromogenes
NCBI taxonomy Id: 1963
Other names: ATCC 25479, ATCC 3336, Actinomyces olivochromogenus, CBS 889.69, DSM 40451, IFO 13067, IFO 3178, IMET 40352, ISP 5451, JCM 4163, JCM 4500, KCTC 9064, NBRC 13067, NBRC 3178, NRRL-ISP 5451, S. olivochromogenes, Streptomyces olivichromogenes, Streptomyces olivochromogenus
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