STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUN49306.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1102 aa)    
Predicted Functional Partners:
KUN48092.1
Peptidase M14; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.792
KUN48225.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.621
KUN43443.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.522
KUN43493.1
Autotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.518
KUN42799.1
TrmB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.481
KUN39725.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.476
KUN46162.1
Carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.457
KUN49307.1
TrmB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.456
secY
Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.442
secY-2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SecY/SEC61-alpha family.
    
   0.442
Your Current Organism:
Streptomyces olivochromogenes
NCBI taxonomy Id: 1963
Other names: ATCC 25479, ATCC 3336, Actinomyces olivochromogenus, CBS 889.69, DSM 40451, IFO 13067, IFO 3178, IMET 40352, ISP 5451, JCM 4163, JCM 4500, KCTC 9064, NBRC 13067, NBRC 3178, NRRL-ISP 5451, S. olivochromogenes, Streptomyces olivichromogenes, Streptomyces olivochromogenus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.