Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ssuB_1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)    
Predicted Functional Partners:
ssuC_2
Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.981
ssuC_1
Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.980
KUN46694.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.945
KUN43522.1
Sulfate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.936
KUN43817.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.922
ssuC_3
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.914
ssuC_5
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.913
ssuC_4
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.906
ssuC_6
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.902
KUN43521.1
Sulfate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.892
Your Current Organism:
Streptomyces olivochromogenes
NCBI taxonomy Id: 1963
Other names: ATCC 25479, ATCC 3336, Actinomyces olivochromogenus, CBS 889.69, DSM 40451, IFO 13067, IFO 3178, IMET 40352, ISP 5451, JCM 4163, JCM 4500, KCTC 9064, NBRC 13067, NBRC 3178, NRRL-ISP 5451, S. olivochromogenes, Streptomyces olivichromogenes, Streptomyces olivochromogenus
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