Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
xynA_2Endo-1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology. (453 aa)    
Predicted Functional Partners:
KUN45537.1
1,4-beta-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.952
KUN48168.1
Rhamnogalacturonan acetylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.934
KUN43490.1
Carbohydrate esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.930
KUN48179.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.899
KUN49841.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.898
KUN45968.1
Arabinan endo-1,5-alpha-L-arabinosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.890
xynA
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.889
KUN43492.1
Beta-xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
 
 
 0.883
KUN42658.1
G-D-S-L family lipolytic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.878
KUN41381.1
SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.876
Your Current Organism:
Streptomyces olivochromogenes
NCBI taxonomy Id: 1963
Other names: ATCC 25479, ATCC 3336, Actinomyces olivochromogenus, CBS 889.69, DSM 40451, IFO 13067, IFO 3178, IMET 40352, ISP 5451, JCM 4163, JCM 4500, KCTC 9064, NBRC 13067, NBRC 3178, NRRL-ISP 5451, S. olivochromogenes, Streptomyces olivichromogenes, Streptomyces olivochromogenus
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