STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUN46413.1Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)    
Predicted Functional Partners:
KUN48479.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.936
KUN42633.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.936
lepA
Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
    
  0.876
KUN42815.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.809
KUN37253.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.809
KUN43334.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.807
KUN49302.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.790
KUN49020.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.790
KUN49041.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.790
AQJ27_06065
Putative serine/threonine-protein kinase PknB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.790
Your Current Organism:
Streptomyces olivochromogenes
NCBI taxonomy Id: 1963
Other names: ATCC 25479, ATCC 3336, Actinomyces olivochromogenus, CBS 889.69, DSM 40451, IFO 13067, IFO 3178, IMET 40352, ISP 5451, JCM 4163, JCM 4500, KCTC 9064, NBRC 13067, NBRC 3178, NRRL-ISP 5451, S. olivochromogenes, Streptomyces olivichromogenes, Streptomyces olivochromogenus
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