STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUN45527.1ATP/GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (817 aa)    
Predicted Functional Partners:
KUN45528.1
PucR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.733
KUN45526.1
4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.685
KUN48397.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.546
KUN45719.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.546
KUN45556.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.546
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
   0.546
KUN45006.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.546
KUN44474.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.546
KUN34020.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
   0.546
KUN45529.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.531
Your Current Organism:
Streptomyces olivochromogenes
NCBI taxonomy Id: 1963
Other names: ATCC 25479, ATCC 3336, Actinomyces olivochromogenus, CBS 889.69, DSM 40451, IFO 13067, IFO 3178, IMET 40352, ISP 5451, JCM 4163, JCM 4500, KCTC 9064, NBRC 13067, NBRC 3178, NRRL-ISP 5451, S. olivochromogenes, Streptomyces olivichromogenes, Streptomyces olivochromogenus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.