STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUN44974.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)    
Predicted Functional Partners:
KUN44973.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
KUN41353.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.751
KUN45136.1
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
       0.688
KUN44971.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.612
KUN44975.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.604
KUN46505.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.479
scrA
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.470
KUN46485.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.430
KUN46395.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.424
Your Current Organism:
Streptomyces olivochromogenes
NCBI taxonomy Id: 1963
Other names: ATCC 25479, ATCC 3336, Actinomyces olivochromogenus, CBS 889.69, DSM 40451, IFO 13067, IFO 3178, IMET 40352, ISP 5451, JCM 4163, JCM 4500, KCTC 9064, NBRC 13067, NBRC 3178, NRRL-ISP 5451, S. olivochromogenes, Streptomyces olivichromogenes, Streptomyces olivochromogenus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.