STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFH23_02338Unannotated protein. (252 aa)    
Predicted Functional Partners:
DFH23_02339
Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.998
DFH23_02337
Unannotated protein.
 
 
 0.993
DFH23_01408
Unannotated protein.
 
 0.991
GCA_000729995_00350
Unannotated protein.
  
 0.990
DFH23_07370
Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.990
GCA_000729995_07587
Unannotated protein.
  
 0.990
DFH23_00467
Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 0.988
DFH23_07697
Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.987
DFH23_03117
Unannotated protein.
  
 0.984
GCA_000729995_02283
Unannotated protein.
  
 0.976
Your Current Organism:
Caballeronia sordidicola
NCBI taxonomy Id: 196367
Other names: Burkholderia sordidicola, Burkholderia sp. KOPRI26592, Burkholderia sp. KOPRI26633, Burkholderia sp. PAMC 26510, Burkholderia sp. PAMC 26577, C. sordidicola, CCUG 49583, Caballeronia sordidicola (Lim et al. 2003) Dobritsa and Samadpour 2016, JCM 11778, KCTC 12081, Paraburkholderia sordidicola, Paraburkholderia sordidicola (Lim et al. 2003) Sawana et al. 2015, strain S5-B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.