STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900169515_01207Unannotated protein. (126 aa)    
Predicted Functional Partners:
GCA_900169515_01205
Unannotated protein.
    
  0.821
GCA_900169515_02012
Unannotated protein.
   
 0.779
GCA_900169515_01206
Unannotated protein.
    
 0.761
GCA_900169515_01202
Unannotated protein.
    
  0.756
GCA_900169515_01986
Unannotated protein.
  
 0.743
GCA_900169515_00493
Unannotated protein.
 
 0.665
GCA_900169515_00593
Unannotated protein.
 
 0.657
GCA_900169515_01433
Unannotated protein.
  
 0.606
GCA_900169515_01204
Unannotated protein.
       0.573
GCA_900169515_01203
Unannotated protein.
       0.550
Your Current Organism:
Varibaculum timonense
NCBI taxonomy Id: 1964383
Other names: CSUR P3369, V. timonense, Varibaculum sp. Marseille-P3369, strain Marseille-P3369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.