STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4U79_01338Uncharacterized protein. (239 aa)    
Predicted Functional Partners:
B4U79_16144
C2H2-type domain-containing protein.
   
 0.695
B4U79_01933
Polycomb protein EED-like protein.
    
 0.682
B4U79_04285
Polycomb protein suz12-B-like protein.
    
 0.679
B4U79_06316
Set1/Ash2 histone methyltransferase complex subunit ASH2-like protein.
    
 0.660
B4U79_12494
Retinoblastoma-binding protein 5-like protein.
    
 0.660
B4U79_07187
Histone-binding protein RBBP4-like protein.
    
 0.659
B4U79_12559
Leucine-rich repeat serine/threonine-protein kinase 1-like protein.
    
 0.636
B4U79_06414
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.596
B4U79_11138
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.596
B4U79_18796
Transposase-like protein.
  
 
  0.591
Your Current Organism:
Dinothrombium tinctorium
NCBI taxonomy Id: 1965070
Other names: Acarus tinctorius, D. tinctorium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.