STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4U79_00783CCR4-NOT transcription complex subunit 6-like protein. (164 aa)    
Predicted Functional Partners:
B4U79_15960
CCR4-NOT transcription complex subunit 1-like protein.
   
 0.949
B4U79_14283
CCR4-NOT transcription complex subunit 7-like protein.
    
 0.946
B4U79_15849
Cell differentiation protein RCD1-like protein.
    
 0.941
B4U79_00229
CCR4-NOT transcription complex subunit 3-like protein.
    
 0.937
B4U79_04441
CCR4-NOT transcription complex subunit 4-like isoform X5.
    
 0.917
B4U79_03501
CCR4-NOT transcription complex subunit 6-like protein.
 
      0.900
B4U79_01595
Parafibromin-like protein.
   
 
 0.856
B4U79_05344
RNA polymerase II-associated factor 1-like isoform 1.
    
   0.840
B4U79_00614
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.840
B4U79_03753
CCR4-NOT transcription complex subunit 11-like protein.
    
 0.789
Your Current Organism:
Dinothrombium tinctorium
NCBI taxonomy Id: 1965070
Other names: Acarus tinctorius, D. tinctorium
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