STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A53_03190Methyltranfer_dom domain-containing protein. (535 aa)    
Predicted Functional Partners:
B0A53_02619
Uncharacterized protein.
    
 0.859
B0A53_03968
WD_REPEATS_REGION domain-containing protein.
    
 0.824
B0A53_03875
WD_REPEATS_REGION domain-containing protein.
    
 0.822
B0A53_04084
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
     
 0.757
B0A53_02296
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
     
 0.745
B0A53_02274
Mitochondrial inner membrane protease subunit.
   
 
 0.548
B0A53_04300
Uncharacterized protein.
     
 0.545
B0A53_00154
Uncharacterized protein.
     
 0.545
B0A53_02507
Uncharacterized protein.
     
 0.502
B0A53_03587
WD_REPEATS_REGION domain-containing protein.
     
 0.468
Your Current Organism:
Rhodotorula sp. CCFEE5036
NCBI taxonomy Id: 1965284
Other names: R. sp. CCFEE 5036, Rhodotorula sp. CCFEE 5036
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