Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0061 | Cgl0062 | cg0080 | cg0081 | CorA-like Mg2+ transporter protein. | Putative tautomerase. | 0.553 |
Cgl0061 | Cgl0063 | cg0080 | cg0082 | CorA-like Mg2+ transporter protein. | Voltage gated chloride channel. | 0.428 |
Cgl0062 | Cgl0061 | cg0081 | cg0080 | Putative tautomerase. | CorA-like Mg2+ transporter protein. | 0.553 |
Cgl0062 | Cgl0063 | cg0081 | cg0082 | Putative tautomerase. | Voltage gated chloride channel. | 0.540 |
Cgl0062 | Cgl2796 | cg0081 | cg3096 | Putative tautomerase. | ALDEHYDE DEHYDROGENASE; Belongs to the aldehyde dehydrogenase family. | 0.620 |
Cgl0062 | tsf | cg0081 | cg2221 | Putative tautomerase. | TRANSLATION ELONGATION FACTOR TS (EF-TS); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.773 |
Cgl0063 | Cgl0061 | cg0082 | cg0080 | Voltage gated chloride channel. | CorA-like Mg2+ transporter protein. | 0.428 |
Cgl0063 | Cgl0062 | cg0082 | cg0081 | Voltage gated chloride channel. | Putative tautomerase. | 0.540 |
Cgl2796 | Cgl0062 | cg3096 | cg0081 | ALDEHYDE DEHYDROGENASE; Belongs to the aldehyde dehydrogenase family. | Putative tautomerase. | 0.620 |
tsf | Cgl0062 | cg2221 | cg0081 | TRANSLATION ELONGATION FACTOR TS (EF-TS); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | Putative tautomerase. | 0.773 |