STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0111Bacterial regulatory proteins, deoR family. (282 aa)    
Predicted Functional Partners:
xylB
XYLULOSE KINASE.
 
  
 0.874
ptsF
SUGAR SPECIFIC PTS SYSTEM, FRUCTOSE/MANNITOL-SPECIFIC TRANSPORT PROTEIN.
 
  
 0.842
Cgl1774
Hypothetical protein predicted by Glimmer/Critica.
      
 0.798
Cgl1934
Transcriptional regulator of sugar metabolism, DeoR family.
  
     0.775
pfkB
1-PHOSPHOFRUCTOKINASE PROTEIN; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.748
Cgl0779
PUTATIVE DNA HELICASE RECQ.
      
 0.684
priA
Primosomal protein N' (replication factor Y)-superfamily II helicase; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
      
 0.684
Cgl0411
Extremely conserved POSSIBLE DNA-BINDING PROTEIN.
      
 0.681
rbtT
PUTATIVE RIBITOL TRANSPORTER.
 
    0.676
cg0869
Hypothetical protein predicted by Glimmer/Critica.
      
 0.662
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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