Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0281 | Cgl0282 | cg0338 | cg0339 | CONSERVED HYPOTHETICAL PROTEIN. | Translation initiation inhibitor. | 0.867 |
Cgl0281 | whiB4 | cg0338 | cg0337 | CONSERVED HYPOTHETICAL PROTEIN. | PUTATIVE REGULATORY PROTEIN (WHIB-RELATED PROTEIN); Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.599 |
Cgl0282 | Cgl0281 | cg0339 | cg0338 | Translation initiation inhibitor. | CONSERVED HYPOTHETICAL PROTEIN. | 0.867 |
Cgl0282 | fusA | cg0339 | cg0583 | Translation initiation inhibitor. | ELONGATION FACTOR G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.467 |
Cgl0282 | whiB4 | cg0339 | cg0337 | Translation initiation inhibitor. | PUTATIVE REGULATORY PROTEIN (WHIB-RELATED PROTEIN); Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.599 |
fusA | Cgl0282 | cg0583 | cg0339 | ELONGATION FACTOR G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | Translation initiation inhibitor. | 0.467 |
whiB4 | Cgl0281 | cg0337 | cg0338 | PUTATIVE REGULATORY PROTEIN (WHIB-RELATED PROTEIN); Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | CONSERVED HYPOTHETICAL PROTEIN. | 0.599 |
whiB4 | Cgl0282 | cg0337 | cg0339 | PUTATIVE REGULATORY PROTEIN (WHIB-RELATED PROTEIN); Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | Translation initiation inhibitor. | 0.599 |