STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0285PUTATIVE TRANSCRIPTION REGULATOR PROTEIN, MarR fam. (155 aa)    
Predicted Functional Partners:
Cgl0289
Acyl dehydratase.
 
  
 0.992
Cgl0283
PUTATIVE INTEGRAL MEMBRANE TRANSPORT PROTEIN.
     
 0.987
fabG1
3-OXOACYL-(ACYL-CARRIER PROTEIN) REDUCTASE.
 
   
 0.937
fadD1
PUTATIVE FATTY-ACID--COA LIGASE TRANSMEMBRANE PROTEIN.
  
  
 0.883
ssiF
PUTATIVE MONOXYGENASE.
  
  
 0.837
fadE
GLUTARYL-COA DEHYDROGENASE.
 
  
 0.836
Cgl0287
Metal-dependent hydrolase of the TIM-barrel fold.
 
     0.821
ssiG
PUTATIVE MONOXYGENASE.
   
  
 0.799
Cgl2382
Putative transcriptional regulator PadR-like family.
  
    0.630
Cgl0200
PUTATIVE ABC-TYPE POLYSACCHARIDE/POLYOL PHOSPHATE EXPORT SYTEM, ATPASE.
  
    0.507
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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