STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rmlB1DTDP-GLUCOSE 4,6-DEHYDRATASE; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (339 aa)    
Predicted Functional Partners:
rmlA1
TDP-GLUCOSE PYROPHOSPHORYLASE; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
 0.999
rmlCD
DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE, dtdp-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 0.999
capD
PROBABLE DTDP-GLUCOSE 4,6-DEHYDRATASE TRANSMEMBRANE PROTEIN.
  
  
 0.968
Cgl0338
Membrane protein.
  
  
 0.823
Cgl0348
Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.812
glf
UDP-GALACTOPYRANOSE MUTASE.
  
  
 0.812
uspA1
Universal stress protein UspA and related nucleotide-binding proteins.
      
 0.799
ufaA
PUTATIVE CYCLOPROPANE FATTY ACID SYNTHASE (CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE).
     
 0.782
wzx
Putative translocase involved in export of a cell surface polysaccaride.
  
  
 0.768
wbbL
Putative rhamnosyl transferase WbbL.
 
  
 0.762
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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