STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
capDPROBABLE DTDP-GLUCOSE 4,6-DEHYDRATASE TRANSMEMBRANE PROTEIN. (604 aa)    
Predicted Functional Partners:
Cgl0348
Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.998
Cgl0349
Glycosyltransferase.
  
 0.992
Cgl0346
Secreted protein, carrying a eukaryotic domain.
  
    0.971
rmlB1
DTDP-GLUCOSE 4,6-DEHYDRATASE; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.968
wzz
Cell surface polysaccharide biosynthesis / Chain length determinant protein.
 
  
 0.958
rmlCD
DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE, dtdp-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
 
 0.913
ptpA2
Low molecular weight phosphotyrosine protein phosp.
  
  
 0.861
Cgl0364
PUTATIVE ACETYL TRANSFERASE PROTEIN.
 
  
 0.812
uspA1
Universal stress protein UspA and related nucleotide-binding proteins.
      
 0.793
Cgl0350
GLYCOSYL TRANSFERASE.
 
  
 0.743
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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