STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0395Conserved hypothetical protein. (271 aa)    
Predicted Functional Partners:
Cgl0396
Conserved hypothetical protein.
       0.834
murB2
PROBABLE UDP-N-ACETYLENOLPYRUVOYLGLUCOSAMINE REDUC; Cell wall formation.
  
    0.713
Cgl0394
Conserved hypothetical protein.
       0.637
Cgl0574
Membrane protein.
  
     0.629
Cgl2585
Conserved hypothetical protein.
  
     0.582
Cgl0398
Hypothetical protein.
       0.571
Cgl0339
PROBABLE METALLOPEPTIDASE.
 
     0.534
Cgl0602
Conserved hypothetical protein.
  
    0.530
cg0478
Hypothetical protein predicted by Glimmer.
       0.478
Cgl1072
Predicted Zn-dependent hydrolase of the beta-lactamase fold.
  
    0.463
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.