Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0438 | Cgl0439 | cg0519 | cg0520 | PUTATIVE PHOSPHOGLYCERATE MUTASE. | Secreted thiol-disulfide isomerase or thioredoxin. | 0.987 |
Cgl0438 | Cgl0441 | cg0519 | cg0523 | PUTATIVE PHOSPHOGLYCERATE MUTASE. | Membrane protein required for cytochrome c biosynthesis. | 0.863 |
Cgl0438 | ccsA | cg0519 | cg0522 | PUTATIVE PHOSPHOGLYCERATE MUTASE. | Cytochrome c biogenesis protein transmembrane prot. | 0.916 |
Cgl0438 | ccsB | cg0519 | cg0524 | PUTATIVE PHOSPHOGLYCERATE MUTASE. | Cytochrome c assembly membrane protein. | 0.737 |
Cgl0438 | hemL | cg0519 | cg0518 | PUTATIVE PHOSPHOGLYCERATE MUTASE. | GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE. | 0.949 |
Cgl0438 | hemY | cg0519 | cg0517 | PUTATIVE PHOSPHOGLYCERATE MUTASE. | PUTATIVE PROTOPORPHYRINOGEN OXIDASE; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.717 |
Cgl0439 | Cgl0438 | cg0520 | cg0519 | Secreted thiol-disulfide isomerase or thioredoxin. | PUTATIVE PHOSPHOGLYCERATE MUTASE. | 0.987 |
Cgl0439 | Cgl0441 | cg0520 | cg0523 | Secreted thiol-disulfide isomerase or thioredoxin. | Membrane protein required for cytochrome c biosynthesis. | 0.982 |
Cgl0439 | ccsA | cg0520 | cg0522 | Secreted thiol-disulfide isomerase or thioredoxin. | Cytochrome c biogenesis protein transmembrane prot. | 0.998 |
Cgl0439 | ccsB | cg0520 | cg0524 | Secreted thiol-disulfide isomerase or thioredoxin. | Cytochrome c assembly membrane protein. | 0.991 |
Cgl0439 | hemL | cg0520 | cg0518 | Secreted thiol-disulfide isomerase or thioredoxin. | GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE. | 0.980 |
Cgl0439 | hemY | cg0520 | cg0517 | Secreted thiol-disulfide isomerase or thioredoxin. | PUTATIVE PROTOPORPHYRINOGEN OXIDASE; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.877 |
Cgl0439 | qcrA1 | cg0520 | cg2404 | Secreted thiol-disulfide isomerase or thioredoxin. | RIESKE IRON-SULFUR PROTEIN; Iron-sulfur subunit of the cytochrome bc1 complex, an essential component of the respiratory electron transport chain required for ATP synthesis. The bc1 complex catalyzes the oxidation of menaquinol and the reduction of cytochrome c in the respiratory chain. The bc1 complex operates through a Q-cycle mechanism that couples electron transfer to generation of the proton gradient that drives ATP synthesis. | 0.496 |
Cgl0441 | Cgl0438 | cg0523 | cg0519 | Membrane protein required for cytochrome c biosynthesis. | PUTATIVE PHOSPHOGLYCERATE MUTASE. | 0.863 |
Cgl0441 | Cgl0439 | cg0523 | cg0520 | Membrane protein required for cytochrome c biosynthesis. | Secreted thiol-disulfide isomerase or thioredoxin. | 0.982 |
Cgl0441 | Cgl2456 | cg0523 | cg2699 | Membrane protein required for cytochrome c biosynthesis. | Putative membrane protein. | 0.750 |
Cgl0441 | ccsA | cg0523 | cg0522 | Membrane protein required for cytochrome c biosynthesis. | Cytochrome c biogenesis protein transmembrane prot. | 0.992 |
Cgl0441 | ccsB | cg0523 | cg0524 | Membrane protein required for cytochrome c biosynthesis. | Cytochrome c assembly membrane protein. | 0.998 |
Cgl0441 | ctaF | cg0523 | cg2408 | Membrane protein required for cytochrome c biosynthesis. | Putative membrane protein; Part of cytochrome c oxidase, its function is unknown; Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | 0.745 |
Cgl0441 | hemL | cg0523 | cg0518 | Membrane protein required for cytochrome c biosynthesis. | GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE. | 0.838 |
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