STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0500ABC TRANSPORTER, NUCLEOTIDE BINDING/ATPASE PROTEIN. (264 aa)    
Predicted Functional Partners:
Cgl0502
cobalamin/Fe3+-siderophores transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.995
Cgl0501
cobalamin/Fe3+-siderophores transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.992
Cgl0808
ABC-type cobalamin/Fe3+-siderophores transport system, secreted component.
 
 
 0.979
Cgl0668
ABC-type cobalamin/Fe3+-siderophores transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.978
irp1
DTXR/IRON REGULATED LIPOPROTEIN PRECURSOR, secrete.
 
 
 0.977
Cgl0336
cobalamin/Fe3+-siderophores transport system, secreted component.
 
  
 0.972
Cgl2035
ABC-type cobalamin/Fe3+-siderophores transport system, secreted component.
 
 
 0.932
Cgl1257
ABC-type cobalamin/Fe3+-siderophores transport system secreted component.
 
 
 0.922
Cgl3075
ABC-type cobalamin/Fe3+-siderophores transport system, secreted component.
 
 
 0.917
Cgl0667
ABC-type cobalamin/Fe3+-siderophores transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 0.895
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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