STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0547HD superfamily hydrolase. (245 aa)    
Predicted Functional Partners:
Cgl0548
FERREDOXIN REDUCTASE.
  
  
 0.998
fabG2
PROBABLE SHORT-CHAIN DEHYDROGENASE, secreted.
  
  
 0.995
fdxB
FERREDOXIN.
  
    0.969
betB
PUTATIVE BETAINE ALDEHYDE DEHYDROGENASE (BADH) OXIDOREDUCTASE.
  
  
 0.814
cytP
CYTOCHROME P450.
  
    0.790
Cgl0551
Putative PEP-utilizing enzyme.
  
    0.733
suhB
MYO-INOSITOL-1(OR 4)-MONOPHOSPHATASE.
     
 0.707
Cgl0552
Pyruvate phosphate dikinase, PEP/pyruvate binding.
  
    0.679
Cgl0800
Inositol monophosphatase.
  
  
 0.648
hisN
Inositol monophosphatase; Catalyzes the dephosphorylation of histidinol-phosphate to histidinol, the direct precursor of histidine.
     
 0.629
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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