STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0650PUTATIVE secreted or MEMBRANE PROTEIN. (460 aa)    
Predicted Functional Partners:
Cgl3067
Membrane protease subunit, stomatin/prohibitin homologs.
  
  
 0.981
Cgl1533
Secreted protease subunit, stomatin/prohibitin homolog.
   
 
 0.977
Cgl1374
Conserved hypothetical protein.
   
  
 0.774
Cgl0786
Membrane protein.
      
 0.773
Cgl2836
Membrane protease subunit, stomatin/prohibitin homolog.
     
 0.773
Cgl2539
Conserved hypothetical protein.
   
  
 0.745
Cgl2030
Predicted ATPase with chaperone activity.
      
 0.709
Cgl1534
Membrane protein implicated in regulation of membrane protease activity.
  
  
 0.669
Cgl0008
UNCHARACTERIZED MEMBRANE PROTEIN.
      
 0.600
atpF
ATP synthase B chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
  
 0.475
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.