STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl1079ABC-type cobalt transport system, ATPase component. (446 aa)    
Predicted Functional Partners:
Cgl1080
ABC-type cobalt transport system, permease component CbiQ.
 0.999
Cgl1078
Putative membrane protein.
 
  
 0.972
Cgl1081
Adenylate kinase or related kinase.
 
    0.893
Cgl0531
PUTATIVE INTEGRAL MEMBRANE PROTEIN.
 
   0.890
chaA
Ca2+/H+ antiporter.
  
    0.726
Cgl1083
Uncharacterized protein, LmbE homolog].
       0.666
Cgl2114
ABC-type cobalamin/Fe3+-siderophores transport system component.
      
 0.534
Cgl2654
ABC-type dipeptide/oligopeptide/nickel transport system, fused permease and ATPase components; Belongs to the ABC transporter superfamily.
  
  
0.500
Cgl0533
Cobalt transport system, permease component.
 
 
 0.468
Cgl2832
ABC-type cobalt transport system, permease component.
  
 
 0.459
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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