STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl12902-HYDROXYHEPTA-2,4-DIENE-1,7-DIOATE ISOMERASE. (268 aa)    
Predicted Functional Partners:
Cgl1291
SAM-dependent methyltransferase.
       0.834
benC
BENZOATE DIOXYGENASE REDUCTASE.
  
  
 0.834
benD
BENZOATE DIOL DEHYDROGENASE BEND; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.740
dnaQ2
DNA POLYMERASE III, EPSILON SUBUNIT, PUTATIVE.
  
    0.733
menG
S-ADENOSYLMETHIONINE:2-DEMETHYLMENAQUINONE METHYLT; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions (By similarity).
     
 0.707
Cgl1288
Predicted signal-transduction protein containing cAMP-binding and CBS domain.
  
    0.641
modB
Sulfate/molybdate transport system, permease component.
   
  
 0.537
ssuB
ALIPHATIC SULFONATES ATP-BINDING ABC TRANSPORTERPROTEIN; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system (Probable). Is also involved in taurine transport. Seems to not be involved in long chain aliphatic sulfonates transport (chain length of eight carbon atoms or more).
   
  
 0.505
phoB
ALKALINE PHOSPHATASE PRECURSOR; Belongs to the alkaline phosphatase family.
  
  
 0.436
serA
Phosphoglycerate Dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 0.431
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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