STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl1312Putative secreted protein. (159 aa)    
Predicted Functional Partners:
Cgl0094
PUTATIVE HEAT SHOCK PROTEIN (HSP90-FAMILY).
    
 0.947
Cgl0739
Superfamily II DNA/RNA helicase, SNF2 family.
    
 0.847
ppp2
Probable protein phosphatase.
   
 0.834
ppp
PROTEIN PHOSPHATASE.
  
 0.831
fkpA
PROBABLE FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOME; PPIases accelerate the folding of proteins; Belongs to the FKBP-type PPIase family.
    
 0.780
Cgl2055
Ankyrin repeat protein.
   
 0.722
Cgl2345
Ankyrin repeat protein.
   
 0.722
Cgl0130
REPEAT CONTAINING PROTEIN.
   
 0.721
Cgl2587
Membrane protein, hemolysin III homolog.
   
 0.716
cglIIR
RESTRICTION ENDONUCLEASE CGLIIR PROTEIN.
   
 0.707
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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