STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uspA1Universal stress protein UspA and related nucleotide-binding proteins. (147 aa)    
Predicted Functional Partners:
Cgl1216
Conserved hypothetical protein.
      
 0.981
Cgl1214
Conserved hypothetical protein.
   
  
 0.917
rmlB1
DTDP-GLUCOSE 4,6-DEHYDRATASE; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
      
 0.799
capD
PROBABLE DTDP-GLUCOSE 4,6-DEHYDRATASE TRANSMEMBRANE PROTEIN.
      
 0.793
nucS
Predicted nuclease of the RecB family; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
  
  
 0.754
ufaA
PUTATIVE CYCLOPROPANE FATTY ACID SYNTHASE (CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE).
      
 0.703
uvrB
EXCINUCLEASE ABC SUBUNIT B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
  
  
 0.643
mrcB
Membrane carboxypeptidase, PENICILLIN-BINDING PROTEIN.
   
  
 0.629
dctA
Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
      
 0.622
uspA3
UNIVERSAL STRESS PROTEIN FAMILY.
  
   
 0.502
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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