STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl1820Putative transcriptional regulator. (127 aa)    
Predicted Functional Partners:
Cgl1235
TRANSCRIPTIONAL REGULATOR, CRO/CI FAMILY.
  
  
 0.808
Cgl2394
ATP-dependent transcriptional regulator, LuxR family.
   
 
 0.799
Cgl1676
Hypothetical protein predicted by Glimmer/Critica.
      
 0.793
Cgl2894
Bacterial regulatory proteins, GntR family.
   
  
 0.791
cgtR6
Putative two component response regulator.
   
 
 0.761
Cgl2445
Bacterial regulatory proteins, TetR family.
      
 0.742
cgtS4
Probable two component sensor kinase.
      
 0.739
Cgl1157
Bacterial regulatory proteins, tetR family.
      
 0.700
cgtS6
Probable two component sensor kinase.
      
 0.700
Cgl1816
Putative secreted protein.
      
 0.639
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.