STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl1961Similar to phage shock protein A. (276 aa)    
Predicted Functional Partners:
Cgl1957
Hypothetical protein predicted by Glimmer/Critica.
      
 0.973
Cgl1962
Predicted transcriptional regulator.
  
  
 0.815
Cgl2179
Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
    0.776
ribX
Putative membrane protein-C. ammoniagenes RibX homolog.
  
    0.775
Cgl0853
Putative chorismate mutase.
  
    0.773
Cgl0681
Conserved hypothetical protein.
  
    0.770
Cgl2076
Putative F0F1-type ATP synthase b subunit.
  
    0.755
Cgl0610
Conserved hypothetical membrane protein.
 
 
 0.746
Cgl2987
Conserved hypothetical protein.
  
    0.743
cg0496
Thiol-disulfide isomerase or thioredoxin.
  
     0.742
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.