STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2009Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (210 aa)    
Predicted Functional Partners:
Cgl2010
Signal transduction histidine kinase.
 
 0.973
cgtS11
Probable two component sensor kinase.
 
 0.880
cgtS10
Probable two component sensor kinase.
 
 
 0.799
Cgl2011
ABC-type transport system, involved in lipoprotein release, permease component.
 
  
 0.641
pbp
PENICILLIN-BINDING PROTEIN, PUTATIVE D-ALANYL-D-ALANINE CARBOXYPEPTIDASE.
  
    0.609
Cgl1038
SENSORY BOX/GGDEF FAMILY PROTEIN.
  
  
 0.549
Cgl2012
ABC-type transport system, involved in lipoprotein release, ATPase component.
  
   0.521
benK1
PUTATIVE BENZOATE TRANSPORT PROTEIN.
   
    0.493
map2
METHIONINE AMINOPEPTIDASE; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
       0.492
cgtS7
PUTATIVE TWO COMPONENT SENSOR KINASE.
 
 
 0.477
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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