STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2010Signal transduction histidine kinase. (359 aa)    
Predicted Functional Partners:
Cgl2009
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 0.973
cgtR11
Putative two component response regulator.
 
 0.883
cgtR6
Putative two component response regulator.
 
 
 0.858
cgtR10
Putative two component response regulator.
 
 
 0.855
cgtR7
Putative two component response regulator.
 
 
 0.850
Cgl2011
ABC-type transport system, involved in lipoprotein release, permease component.
 
    0.733
pbp
PENICILLIN-BINDING PROTEIN, PUTATIVE D-ALANYL-D-ALANINE CARBOXYPEPTIDASE.
  
    0.646
cgtS10
Probable two component sensor kinase.
  
    0.639
Cgl2012
ABC-type transport system, involved in lipoprotein release, ATPase component.
  
    0.558
map2
METHIONINE AMINOPEPTIDASE; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
  
    0.536
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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