STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2076Putative F0F1-type ATP synthase b subunit. (263 aa)    
Predicted Functional Partners:
Cgl2075
Predicted metal-binding, possibly nucleic acid-binding protein.
     
 0.858
rnc
RIBONUCLEASE III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
 
  
 0.819
ponA
PENICILLIN-BINDING PROTEIN 1B.
 
 
 
 0.788
Cgl2498
Putative membrane protein.
  
    0.788
Cgl0681
Conserved hypothetical protein.
  
  
 0.775
Cgl2932
Conserved hypothetical protein.
  
    0.771
Cgl0853
Putative chorismate mutase.
  
    0.762
Cgl0774
Conserved hypothetical protein.
  
    0.761
ribX
Putative membrane protein-C. ammoniagenes RibX homolog.
  
     0.761
Cgl2374
Putative membrane protein.
  
    0.759
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.