STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2115Predicted transcriptional regulator. (147 aa)    
Predicted Functional Partners:
Cgl2342
Conserved hypothetical protein.
   
    0.853
Cgl2114
ABC-type cobalamin/Fe3+-siderophores transport system component.
  
    0.592
Cgl2113
ABC-type cobalamin/Fe3+-siderophores transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
    0.565
Cgl2116
DNA polymerase III epsilon subunit or related 3'-5' exonuclease.
  
    0.541
Cgl1097
Putative secreted protein.
   
    0.483
Cgl1096
Conserved hypothetical protein.
   
    0.473
Cgl2112
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component.
  
    0.426
Cgl1372
Predicted nucleoside-diphosphate-sugar epimerase.
 
    0.421
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.