Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cgl2786 | hom | cg3086 | cg1337 | Putative L,L-Cystathionine gamma-Lyase. | Homoserine Dehydrogenase; Belongs to the homoserine dehydrogenase family. | 0.894 |
| Cgl2786 | ilvA | cg3086 | cg2334 | Putative L,L-Cystathionine gamma-Lyase. | THREONINE DEHYDRATASE; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (By similarity). | 0.838 |
| Cgl2786 | ilvE | cg3086 | cg2418 | Putative L,L-Cystathionine gamma-Lyase. | BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE. | 0.917 |
| Cgl2786 | metB | cg3086 | cg2687 | Putative L,L-Cystathionine gamma-Lyase. | Cystathionine gamma-Synthase. | 0.927 |
| Cgl2844 | ilvA | cg3149 | cg2334 | Aminotransferases class-I. | THREONINE DEHYDRATASE; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (By similarity). | 0.449 |
| Cgl2844 | ilvD | cg3149 | cg1432 | Aminotransferases class-I. | DIHYDROXY-ACID DEHYDRATASE; Belongs to the IlvD/Edd family. | 0.914 |
| Cgl2844 | ilvE | cg3149 | cg2418 | Aminotransferases class-I. | BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE. | 0.932 |
| Cgl2844 | leuA | cg3149 | cg0303 | Aminotransferases class-I. | 2-ISOPROPYLMALATE SYNTHASE; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.906 |
| hom | Cgl2786 | cg1337 | cg3086 | Homoserine Dehydrogenase; Belongs to the homoserine dehydrogenase family. | Putative L,L-Cystathionine gamma-Lyase. | 0.894 |
| hom | ilvA | cg1337 | cg2334 | Homoserine Dehydrogenase; Belongs to the homoserine dehydrogenase family. | THREONINE DEHYDRATASE; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (By similarity). | 0.973 |
| hom | ilvC | cg1337 | cg1437 | Homoserine Dehydrogenase; Belongs to the homoserine dehydrogenase family. | KETOL-ACID REDUCTOISOMERASE; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.545 |
| hom | ilvD | cg1337 | cg1432 | Homoserine Dehydrogenase; Belongs to the homoserine dehydrogenase family. | DIHYDROXY-ACID DEHYDRATASE; Belongs to the IlvD/Edd family. | 0.488 |
| hom | ilvE | cg1337 | cg2418 | Homoserine Dehydrogenase; Belongs to the homoserine dehydrogenase family. | BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE. | 0.903 |
| hom | leuA | cg1337 | cg0303 | Homoserine Dehydrogenase; Belongs to the homoserine dehydrogenase family. | 2-ISOPROPYLMALATE SYNTHASE; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.504 |
| hom | metB | cg1337 | cg2687 | Homoserine Dehydrogenase; Belongs to the homoserine dehydrogenase family. | Cystathionine gamma-Synthase. | 0.911 |
| ilvA | Cgl2786 | cg2334 | cg3086 | THREONINE DEHYDRATASE; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (By similarity). | Putative L,L-Cystathionine gamma-Lyase. | 0.838 |
| ilvA | Cgl2844 | cg2334 | cg3149 | THREONINE DEHYDRATASE; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (By similarity). | Aminotransferases class-I. | 0.449 |
| ilvA | hom | cg2334 | cg1337 | THREONINE DEHYDRATASE; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (By similarity). | Homoserine Dehydrogenase; Belongs to the homoserine dehydrogenase family. | 0.973 |
| ilvA | ilvC | cg2334 | cg1437 | THREONINE DEHYDRATASE; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (By similarity). | KETOL-ACID REDUCTOISOMERASE; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.926 |
| ilvA | ilvD | cg2334 | cg1432 | THREONINE DEHYDRATASE; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (By similarity). | DIHYDROXY-ACID DEHYDRATASE; Belongs to the IlvD/Edd family. | 0.972 |
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