STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2382Putative transcriptional regulator PadR-like family. (192 aa)    
Predicted Functional Partners:
vanA
PROBABLE VANILLATE O-DEMETHYLASE OXYGENASE SUBUNIT.
 
    0.799
vanB
PROBABLE VANILLATE O-DEMETHYLASE.
 
     0.707
vanK
VANILLATE TRANSPORTER VANK.
 
     0.643
Cgl0285
PUTATIVE TRANSCRIPTION REGULATOR PROTEIN, MarR fam.
  
    0.630
cytP
CYTOCHROME P450.
  
     0.609
Cgl0234
Similar to malic enzyme.
  
    0.597
Cgl0235
PUTATIVE ABC TRANSPORTER TRANSMEMBRANE SUBUNIT.
  
    0.558
Cgl2680
AraC-type transcriptional regulator.
  
    0.474
Cgl1084
Putative membrane protein.
  
     0.446
Cgl0551
Putative PEP-utilizing enzyme.
  
    0.444
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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