STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2440Hypothetical protein predicted by Glimmer/Critica. (647 aa)    
Predicted Functional Partners:
Cgl0906
Bacterial regulatory protein, arsR family.
   
    0.766
Cgl2439
ABC-type dipeptide/oligopeptide/nickel transport systems, secreted component.
  
    0.692
Cgl2438
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
  
    0.676
Cgl2437
ABC-type dipeptide/oligopeptide/nickel transport systems, permease component.
  
    0.671
Cgl2435
Alkylhydroperoxidase AhpD family core domain; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
    0.652
Cgl2441
Aminotransferase class-III, pyridoxal-phosphate dependent; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.620
Cgl2436
ATPase component of ABC-type transport system, contains duplicated ATPase domains; Belongs to the ABC transporter superfamily.
  
    0.567
pcaB1
3-CARBOXY-CIS,CIS-MUCONATE CYCLOISOMERASE.
 
    0.532
Cgl2840
Putative secreted protein.
 
    0.441
Cgl0967
Predicted esterase, membrane protein.
  
    0.433
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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