STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2616Bacterial regulatory protein, LysR family; Belongs to the LysR transcriptional regulatory family. (235 aa)    
Predicted Functional Partners:
Cgl0420
Bacterial regulatory protein, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.775
Cgl2068
Bacterial regulatory protein, LysR family; Belongs to the LysR transcriptional regulatory family.
  
    0.746
Cgl2615
PUTATIVE 3-KETOSTEROID DEHYDROGENASE.
  
    0.641
Cgl1174
Bacterial regulatory proteins, crp family.
   
  
 0.625
Cgl0962
Bacterial regulatory proteins, tetR family.
    
 
 0.617
Cgl1992
ABC-type peptide transport system, permease component.
   
  
 0.602
Cgl2915
Bacterial regulatory proteins, GntR family.
   
  
 0.479
benA
BENZOATE 1,2-DIOXYGENASE ALPHA SUBUNIT (AROMATIC RING HYDROXYLATION DIOXYGENASE A).
      
 0.462
Cgl0923
PUTATIVE TETR-FAMILY TRANSCRIPTIONAL REGULATOR.
  
   0.449
fur
FERRIC UPTAKE REGULATION PROTEIN; Belongs to the Fur family.
   
  
 0.439
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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