STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ipsATranscriptional regulator, LacI family; Plays a role in the regulation of cell wall biogenesis. Inositol-dependent transcriptional activator of ino1, which encodes inositol phosphate synthase. Also regulates other target genes, which are most likely involved in the synthesis of inositol-derived cell wall components and mycothiol. Acts by binding to a conserved palindromic motif within the promoter regions. (360 aa)    
Predicted Functional Partners:
Cgl0179
PROBABLE LACI-FAMILY TRANSCRIPTIONAL REGULATOR.
  
    0.775
Cgl2044
PUTATIVE TRANSCRIPTION REGULATION REPRESSOR, LACI FAMILY.
  
     0.775
Cgl1251
LACI-FAMILY TRANSCRIPTIONAL REGULATOR, PROBABLE CATABOLITE CONTROL PROTEIN.
  
     0.774
cg2730
Transcriptional regulator, C-terminus.
  
     0.774
cg2729
TRANSCRIPTIONAL REPRESSOR, LACI FAMILY, N-terminus.
  
     0.715
gltB
GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU.
    
 
 0.695
Cgl2628
ABC-type Mn/Zn transport system, secreted Mn/Zn-binding (lipo)protein (surface adhesin); Belongs to the bacterial solute-binding protein 9 family.
       0.674
Cgl2629
ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component.
       0.667
Cgl2630
ABC-type Mn2+/Zn2+ transport system, permease component.
       0.667
Cgl1703
Putative secreted protein.
   
  
 0.612
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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