Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0571 | Cgl2916 | cg0661 | cg3225 | Conserved HYPOTHETICAL PROTEIN. | Putative serine/threonine-specific protein phosphatase. | 0.552 |
Cgl0571 | pks | cg0661 | cg3178 | Conserved HYPOTHETICAL PROTEIN. | POLYKETIDE SYNTHASE. | 0.723 |
Cgl0571 | pptA | cg0661 | cg2171 | Conserved HYPOTHETICAL PROTEIN. | PHOSPHOPANTHETEINYL TRANSFERASE, IRON-CHELATING COMPLEX SUBUNIT; Belongs to the P-Pant transferase superfamily. | 0.460 |
Cgl1038 | Cgl2916 | cg1179 | cg3225 | SENSORY BOX/GGDEF FAMILY PROTEIN. | Putative serine/threonine-specific protein phosphatase. | 0.603 |
Cgl2912 | Cgl2913 | cg3220 | cg3221 | Putative membrane protein. | Predicted hydrolase of the HAD superfamily. | 0.762 |
Cgl2912 | Cgl2914 | cg3220 | cg3223 | Putative membrane protein. | NADPH-dependent FMN reductase. | 0.653 |
Cgl2912 | Cgl2915 | cg3220 | cg3224 | Putative membrane protein. | Bacterial regulatory proteins, GntR family. | 0.618 |
Cgl2912 | Cgl2916 | cg3220 | cg3225 | Putative membrane protein. | Putative serine/threonine-specific protein phosphatase. | 0.618 |
Cgl2913 | Cgl2912 | cg3221 | cg3220 | Predicted hydrolase of the HAD superfamily. | Putative membrane protein. | 0.762 |
Cgl2913 | Cgl2914 | cg3221 | cg3223 | Predicted hydrolase of the HAD superfamily. | NADPH-dependent FMN reductase. | 0.702 |
Cgl2913 | Cgl2915 | cg3221 | cg3224 | Predicted hydrolase of the HAD superfamily. | Bacterial regulatory proteins, GntR family. | 0.635 |
Cgl2913 | Cgl2916 | cg3221 | cg3225 | Predicted hydrolase of the HAD superfamily. | Putative serine/threonine-specific protein phosphatase. | 0.627 |
Cgl2914 | Cgl2912 | cg3223 | cg3220 | NADPH-dependent FMN reductase. | Putative membrane protein. | 0.653 |
Cgl2914 | Cgl2913 | cg3223 | cg3221 | NADPH-dependent FMN reductase. | Predicted hydrolase of the HAD superfamily. | 0.702 |
Cgl2914 | Cgl2915 | cg3223 | cg3224 | NADPH-dependent FMN reductase. | Bacterial regulatory proteins, GntR family. | 0.746 |
Cgl2914 | Cgl2916 | cg3223 | cg3225 | NADPH-dependent FMN reductase. | Putative serine/threonine-specific protein phosphatase. | 0.737 |
Cgl2914 | Cgl2917 | cg3223 | cg3226 | NADPH-dependent FMN reductase. | Permease of the major facilitator superfamily. | 0.451 |
Cgl2914 | lldA | cg3223 | cg3227 | NADPH-dependent FMN reductase. | PUTATIVE L-LACTATE DEHYDROGENASE. | 0.418 |
Cgl2915 | Cgl2912 | cg3224 | cg3220 | Bacterial regulatory proteins, GntR family. | Putative membrane protein. | 0.618 |
Cgl2915 | Cgl2913 | cg3224 | cg3221 | Bacterial regulatory proteins, GntR family. | Predicted hydrolase of the HAD superfamily. | 0.635 |
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