STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2922SECRETED PHOSPHOHYDROLASE, ICC FAMILY. (539 aa)    
Predicted Functional Partners:
Cgl1038
SENSORY BOX/GGDEF FAMILY PROTEIN.
  
  
 0.603
Cgl1457
Transcriptional regulator, rpiR family.
 
    0.490
Cgl2923
Hypothetical protein predicted by Glimmer/Critica.
  
    0.469
Cgl0016
Bacterial regulatory protein, LysR family; Belongs to the LysR transcriptional regulatory family.
   
    0.465
Cgl2924
Metal-dependent amidase/aminoacylase/carboxypeptidase.
       0.465
Cgl2336
Putative secreted protein.
 
    0.433
Cgl3064
Putative secreted phosphoesterase.
 
    0.417
Cgl2055
Ankyrin repeat protein.
   
 
 0.409
Cgl0130
REPEAT CONTAINING PROTEIN.
    
 
 0.408
Cgl2345
Ankyrin repeat protein.
    
 
 0.408
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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