Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cgl0853 | aroC | cg0975 | cg1829 | Putative chorismate mutase. | PUTATIVE CHORISMATE SYNTHASE; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.973 |
| Cgl0853 | entC | cg0975 | cg1462 | Putative chorismate mutase. | ISOCHORISMATE SYNTHASE. | 0.878 |
| Cgl0853 | pabAB | cg0975 | cg1134 | Putative chorismate mutase. | PARA-AMINOBENZOATE SYNTHASE COMPONENT I and II. | 0.886 |
| Cgl0853 | trpCF | cg0975 | cg3362 | Putative chorismate mutase. | INDOLE-3-GGLYCEROL-PHOSPHATE SYNTHASE/PHOSPHORIBOSYLANTHRANILATE ISOMERASE; Bifunctional enzyme that catalyzes two sequential steps of tryptophan biosynthetic pathway. The first reaction is catalyzed by the isomerase, coded by the TrpF domain; the second reaction is catalyzed by the synthase, coded by the TrpC domain (By similarity). | 0.547 |
| Cgl0853 | trpE | cg0975 | cg3359 | Putative chorismate mutase. | ANTHRANILATE SYNTHASE COMPONENT I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...] | 0.949 |
| Cgl0853 | trpG | cg0975 | cg3360 | Putative chorismate mutase. | ANTHRANILATE SYNTHASE COMPONENT II; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concent [...] | 0.975 |
| Cgl2091 | aroC | cg2293 | cg1829 | Putative indole-3-glycerol phosphate synthase. | PUTATIVE CHORISMATE SYNTHASE; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.746 |
| Cgl2091 | entC | cg2293 | cg1462 | Putative indole-3-glycerol phosphate synthase. | ISOCHORISMATE SYNTHASE. | 0.579 |
| Cgl2091 | pabAB | cg2293 | cg1134 | Putative indole-3-glycerol phosphate synthase. | PARA-AMINOBENZOATE SYNTHASE COMPONENT I and II. | 0.972 |
| Cgl2091 | trpA | cg2293 | cg3364 | Putative indole-3-glycerol phosphate synthase. | TRYPTOPHAN SYNTHASE ALPHA CHAIN; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.997 |
| Cgl2091 | trpB | cg2293 | cg3363 | Putative indole-3-glycerol phosphate synthase. | TRYPTOPHAN SYNTHASE BETA CHAIN; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.997 |
| Cgl2091 | trpCF | cg2293 | cg3362 | Putative indole-3-glycerol phosphate synthase. | INDOLE-3-GGLYCEROL-PHOSPHATE SYNTHASE/PHOSPHORIBOSYLANTHRANILATE ISOMERASE; Bifunctional enzyme that catalyzes two sequential steps of tryptophan biosynthetic pathway. The first reaction is catalyzed by the isomerase, coded by the TrpF domain; the second reaction is catalyzed by the synthase, coded by the TrpC domain (By similarity). | 0.993 |
| Cgl2091 | trpD | cg2293 | cg3361 | Putative indole-3-glycerol phosphate synthase. | ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.988 |
| Cgl2091 | trpE | cg2293 | cg3359 | Putative indole-3-glycerol phosphate synthase. | ANTHRANILATE SYNTHASE COMPONENT I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...] | 0.982 |
| Cgl2091 | trpG | cg2293 | cg3360 | Putative indole-3-glycerol phosphate synthase. | ANTHRANILATE SYNTHASE COMPONENT II; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concent [...] | 0.867 |
| aroC | Cgl0853 | cg1829 | cg0975 | PUTATIVE CHORISMATE SYNTHASE; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Putative chorismate mutase. | 0.973 |
| aroC | Cgl2091 | cg1829 | cg2293 | PUTATIVE CHORISMATE SYNTHASE; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Putative indole-3-glycerol phosphate synthase. | 0.746 |
| aroC | entC | cg1829 | cg1462 | PUTATIVE CHORISMATE SYNTHASE; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | ISOCHORISMATE SYNTHASE. | 0.966 |
| aroC | pabAB | cg1829 | cg1134 | PUTATIVE CHORISMATE SYNTHASE; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | PARA-AMINOBENZOATE SYNTHASE COMPONENT I and II. | 0.927 |
| aroC | trpA | cg1829 | cg3364 | PUTATIVE CHORISMATE SYNTHASE; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | TRYPTOPHAN SYNTHASE ALPHA CHAIN; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.819 |
page 1 of 6