STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl3087Putative secreted protein. (837 aa)    
Predicted Functional Partners:
Cgl3086
NTP pyrophosphohydrolase; Belongs to the Nudix hydrolase family.
  
 0.931
Cgl3088
Uncharacterized membrane protein, virulence factor homolog.
 
  
 0.830
Cgl2866
Conserved hypothetical protein.
  
 
 0.800
Cgl2767
Conserved hypothetical protein.
  
    0.775
Cgl2895
Conserved hypothetical protein.
  
     0.774
Cgl2932
Conserved hypothetical protein.
  
     0.770
Cgl2374
Putative membrane protein.
  
     0.768
Cgl2594
Predicted deacetylase.
  
    0.768
Cgl0468
Conserved hypothetical membrane protein.
  
     0.767
Cgl0774
Conserved hypothetical protein.
  
    0.766
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.