STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000721105_00312Unannotated protein. (249 aa)    
Predicted Functional Partners:
GCA_000721105_00311
Unannotated protein.
       0.880
GCA_000721105_00309
Unannotated protein.
       0.789
GCA_000721105_04524
Unannotated protein.
       0.560
GCA_000721105_04526
Unannotated protein.
       0.560
GCA_000721105_00310
Unannotated protein.
       0.546
GCA_000721105_01938
Unannotated protein.
  
     0.510
GCA_000721105_06163
Unannotated protein.
  
     0.463
GCA_000721105_03425
Unannotated protein.
  
     0.428
GCA_000721105_00307
Unannotated protein.
       0.424
Your Current Organism:
Streptomyces cellulosae
NCBI taxonomy Id: 1968
Other names: ATCC 25439, Actinomyces cellulosae, BCRC 12087, CBS 122.18, CBS 670.69, CCRC 12087, CCRC:12087, DSM 40362, IFO 13027, ISP 5362, JCM 4462, KCTC 9703, LMG 19315, LMG:19315, NBRC 13027, NRRL B-2889, NRRL-ISP 5362, S. cellulosae, Streptomyces cellulosi, VKM Ac-829
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.