STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000721105_06710Unannotated protein. (339 aa)    
Predicted Functional Partners:
GCA_000721105_06709
Unannotated protein.
       0.612
GCA_000721105_00758
Unannotated protein.
  
  
 0.463
GCA_000721105_00831
Unannotated protein.
   
 
 0.461
GCA_000721105_06892
Unannotated protein.
   
 
 0.461
GCA_000721105_01902
Unannotated protein.
  
 
 0.438
GCA_000721105_04743
Unannotated protein.
   
    0.431
GCA_000721105_06953
Unannotated protein.
   
 
 0.416
GCA_000721105_01703
Unannotated protein.
 
    0.415
GCA_000721105_06110
Unannotated protein.
 
    0.413
Your Current Organism:
Streptomyces cellulosae
NCBI taxonomy Id: 1968
Other names: ATCC 25439, Actinomyces cellulosae, BCRC 12087, CBS 122.18, CBS 670.69, CCRC 12087, CCRC:12087, DSM 40362, IFO 13027, ISP 5362, JCM 4462, KCTC 9703, LMG 19315, LMG:19315, NBRC 13027, NRRL B-2889, NRRL-ISP 5362, S. cellulosae, Streptomyces cellulosi, VKM Ac-829
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.