STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORJ63383.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (426 aa)    
Predicted Functional Partners:
ORJ63382.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.852
ORJ63381.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.810
ORJ63379.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.801
ORJ63380.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.801
ORJ55867.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.782
ORJ63384.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
ORJ63385.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.701
ORJ63387.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.578
ORJ63391.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.575
ORJ63378.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.564
Your Current Organism:
Geothermobacter sp. EPRM
NCBI taxonomy Id: 1969733
Other names: G. sp. EPR-M, Geothermobacter sp. EPR-M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.